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Survival Analysis of Drug Treatment

In this panel, you can perform survival analysis based on TCGA patients using specific drug treatment.

GEPIA performs differential analysis of Overall Survival (OS) or Progression-free Interval (PFI) between patients with or without using specific drugs. GEPIA uses Log-rank test, a.k.a the Mantel-Cox test, for hypothesis test.

Parameters:

  • Drugs: Select a drug of interest. Both generic name and trade name are provided. If you are not sure which one to choose, see drug name standarization method.
  • Methods: Select the OS or PFS survival response.
  • Axis Units: Select Month or Day unit for plotting.
  • Colors: Choose color to plot
  • Datasets Selection: Select one or multiple cancer types and click "+" to build the dataset.

Notices:

  • Only patients with drug treatment information are included. Thus the group without using selected drug refers to patients using other drugs.
  • Since special treatment of blood tumor are not included (e.g. stem cell transplantation in DLBC), be careful to combine blood tumor and solid tumor into a uniformed dataset.
  • Notice that there may not be sufficient cases for survial anaysis in single or limited cancer types.

Days
Months

Tips: Ctrl/Command + A: select all cancer types

TCGA Abbr.
Abbr Detail
ACC Adrenocortical carcinoma
BLCA Bladder Urothelial Carcinoma
BRCA Breast invasive carcinoma
CESC Cervical squamous cell carcinoma and endocervical adenocarcinoma
CHOL Cholangiocarcinoma
COAD Colon adenocarcinoma
DLBC Lymphoid Neoplasm Diffuse Large B-cell Lymphoma
ESCA Esophageal carcinoma
GBM Glioblastoma multiforme
HNSC Head and Neck squamous cell carcinoma
KICH Kidney Chromophobe
KIRC Kidney renal clear cell carcinoma
KIRP Kidney renal papillary cell carcinoma
LAML Acute Myeloid Leukemia
LGG Brain Lower Grade Glioma
LIHC Liver hepatocellular carcinoma
LUAD Lung adenocarcinoma
LUSC Lung squamous cell carcinoma
MESO Mesothelioma
OV Ovarian serous cystadenocarcinoma
PAAD Pancreatic adenocarcinoma
PCPG Pheochromocytoma and Paraganglioma
PRAD Prostate adenocarcinoma
READ Rectum adenocarcinoma
SARC Sarcoma
SKCM Skin Cutaneous Melanoma
STAD Stomach adenocarcinoma
TGCT Testicular Germ Cell Tumors
THCA Thyroid carcinoma
THYM Thymoma
UCEC Uterine Corpus Endometrial Carcinoma
UCS Uterine Carcinosarcoma
UVM Uveal Melanoma

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