eQTL
In this panel, you can identify both cis-eQTLs and trans-eQTLs, across 33 cancer types derived from The Cancer Genome Atlas (TCGA).
Parameters:
- Gene: Input a gene/isoform or multiple genes of interest.
- eQTL Type: Choose between "Cis-eQTLs" for local gene expression regulation or "Trans-eQTLs" for distant gene expression regulation.
- TCGA Tumor/Selected Datasets: Select cancer types of interest in the "TCGA Tumor" field and click "add" to build dataset list in the "Selected Datasets" field. Also, manual input of cancer types split by comma (e.g. COAD Tumor,READ Tumor) is also acceptable. The interaction analysis is based on the datasets list.
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