Gene Expression Profiling Interactive Analysis
Enter gene/isoform name:
The indicators in search box are "symbol" or "Ensembl ID" or isoform?
GEPIA3 provides these drug response analyses:
Find Drugs
Enables users to compare survival difference with or without specific drug (without considering gene expression)TCGA Drug Response
Enables users to compare gene/signature expression level between patients with different drug responses annotated in TCGA.Therapy vs Survival in TCGA
This function provides users to compare gene expression-survival relationship between patients with and without specific drug treatment.Cell Line Screens
This function provides users to calculate correlation between gene expression/copy number and drug responses in cell lines.Cell Crispr Screens
This function allows users to compare the cell responses to CRISPR gene perturbation between drug-treated and untreated conditions.GEPIA3 provides these Network Analyses:
Alteration Network
This feature allows users to identify and visualize gene alteration relationships, including co-alteration and mutually exclusive alteration patterns, within selected datasets and genes.Expression Network
This feature allows users to search for genes that are most correlated with a target gene or gene signature within selected datasets.Protein Interaction
The OncoPPI module identifies oncogenic protein-protein interactions (oncoPPIs) for input genes across selected cancer types, leveraging interaction data from large-scale studies and structural databases.Synthetic Lethality and Synthetic Viability
This module allows users to explore genetic interactions (GIs) across selected cancer types, focusing on synthetic lethality (SL) and synthetic viability (SV) relationships between gene pairs.eQTLs
This module allows users to identify both cis-eQTLs and trans-eQTLs across 33 cancer types derived from The Cancer Genome Atlas (TCGA).RNA Alterations analyses:
Allele-Specific Expression
This function enables users to identify allelic expression imbalances in one or more genes, along with the factors driving these imbalances.Alternative Promoter
This function provides users with information on relative promoter activity and enables comparisons between tumor samples and their corresponding peritumor.Gene Fusion
This function allows users to search for gene fusion events in specific cancer types.
Drug Response
Gene Expression vs Drug Response
Gene Regulation Networksl
Genes Alterations
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